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SRX5784813: Metatranscriptome from sampling date 2011-04-29
1 ILLUMINA (Illumina HiSeq 2500) run: 29.7M spots, 5.9G bases, 3.7Gb downloads

Design: In-situ sampling from anoxic tanks of a biological wastewater treatment plant
Submitted by: University of Luxembourg
Study: Systems Biology of Lipid Accumulating Organisms
show Abstracthide Abstract
Characterization of microbial communities at the genomic, transcriptomic, proteomic and metabolomic levels, with a special interest on lipid accumulating bacterial populations, which are naturally enriched in biological wastewater treatment systems and may be harnessed for the conversion of mixed lipid substrates (wastewater) into biodiesel. The project aims to elucidate the genetic blueprints and the functional relevance of specific populations within the community. It focuses on within-population genetic and functional heterogeneity, trying to understand how fine-scale variations contribute to differing lipid accumulating phenotypes. Insights from this project will contribute to the understanding the functioning of microbial ecosystems, and improve optimization and modeling strategies for current and future biological wastewater treatment processes. This BioProject contains datasets derived from the same biological wastewater treatment plant. The date includes metagenomes, metatranscriptomes and organisms isolated in pure cultures.
Sample: Floating sludge islet from anoxic tank wastewater sampled on 2011-04-29
SAMN08974416 • SRS4717492 • All experiments • All runs
Library:
Name: LAO-D35.MT
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METATRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 29.7M spots, 5.9G bases, 3.7Gb
Run# of Spots# of BasesSizePublished
SRR900656829,681,6225.9G3.7Gb2020-01-21

ID:
7780069

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